moleculefinder

Clonidine

C9H9Cl2N3230.09 g/mol Calculated

Also called Catapres-TTS, Catapresan, Catapressan and Chlornidinum.

An alpha-2 agonist used for high blood pressure, ADHD, and withdrawal from opioids and nicotine. Clonidine (C9H9Cl2N3, 230 g/mol) is an alpha-2 agonist dispensed on prescription.

Sources and notes
  • The introductionfrom sourceMoleculeFinder curated
  • Other namesfrom sourcePubChem / Wikidata
  • Formula and weightcomputedPubChem
  • 2D drawingcomputedPubChem structure, drawn by RDKit
  • 3D modelfrom sourcePubChem 3D conformerLoaded after the page has painted, and on a phone only when you ask for it; the 2D drawing shows until it arrives.

Where you encounter it

Dispensed on prescription, not sold on a shelf.

Sources and notes
  • The line abovefrom sourceMoleculeFinder curatedFrom the group the molecule belongs to.

Explore its structure

Choose a part to light it up.

A carbon bonded to three nitrogens, one of them by a double bond, the same group the amino acid arginine carries. Its N-H groups form hydrogen bonds readily.

From: standard chemistry.

Sources and notes
  • The drawingcomputedPubChem structure, drawn by RDKitThe page's one shipped drawing, with the chosen part lit in amber under it.
  • The partscomputedFound by ruleEach part is found by a chemical pattern, never picked by hand atom by atom; its words say where they come from.

Properties and sources

Calculated by PubChem

Molecular formula
C9H9Cl2N3
Molecular weight
230.09 g/mol
XLogP3octanol/water, log units
1.6
Polar surface areatopological
36.4 Ų
H-bond donors
2
H-bond acceptors
1
Rotatable bonds
2
Complexity
222

Measured LD50, HSDB via PubChem

126 mg/kg pure clonidine, rat, oral

An LD50 is an animal study measurement, not a dose for a person.

Reported Hazard label (GHS), ECHA via PubChem

Danger Toxic pictogram (GHS06); hazard statements H301, H310, H330

Reported Licence

The US Food and Drug Administration licenses Clonidine for human use (NDA 018891, authorized October 10, 1984), as Catapres-TTS-1. Drugs@FDA

Groups it belongs to

Category
Prescription medicine
Family
Alpha-2 agonists
Chemical groups
Amines, Aromatics, Halogenated
Elements
Chlorine, Nitrogen
Hazard classes
Acutely toxic, GHS Danger
SMILESC1CN=C(N1)NC2=C(C=CC=C2Cl)Cl

PubChem CID 2803 · Wikidata Q412221 · InChIKey GJSURZIOUXUGAL-UHFFFAOYSA-N · Data refreshed

How MoleculeFinder sources and labels its data

Questions
What is Clonidine?
An alpha-2 agonist used for high blood pressure, ADHD, and withdrawal from opioids and nicotine. Clonidine (C9H9Cl2N3, 230 g/mol) is an alpha-2 agonist dispensed on prescription.
How toxic is Clonidine?
The reported LD50 of Clonidine is 126 mg/kg (rat, oral). An LD50 is an animal study measurement, not a dose for a person. Its GHS hazard label carries the signal word Danger and the hazard pictogram Toxic. from sourcefrom source
What kind of molecule is Clonidine?
Clonidine has the formula C9H9Cl2N3 and a molecular weight of 230.09 g/mol. MoleculeFinder files it under alpha-2 agonists, in the prescription medicine group. from sourcefrom sourcefrom sourcefrom source
Who licenses Clonidine as a medicine?
The US Food and Drug Administration licenses Clonidine for human use (NDA 018891, authorized October 10, 1984), as Catapres-TTS-1. from source
Sources and notes
  • Calculated valuescomputedPubChemComputed from the structure, so no laboratory conditions apply; complexity is PubChem's own structural score.
  • LD50from sourceHSDB via PubChemOther values the sources report: rat, intravenous, 29 mg/kg; rat, another route, 77 mg/kg; rat, another route, 100 mg/kg. The page shows the one LD50 the site uses everywhere.
  • Hazard labelfrom sourceECHA via PubChemThe label combines these classifications.
  • ECHAfrom sourceAttributionSource: European Chemicals Agency, echa.europa.eu.
  • Licencefrom sourceDrugs@FDARead 2026-10-21.
  • Data refreshedfrom sourceMoleculeFinder2026-11-09

Keep exploring

Sources and notes
  • Similar in shapecomputedRDKit Morgan/TanimotoNeighbours by structural fingerprint; the sentence names the chemical groups the two share.
  • The drawingscomputedPubChem structures, drawn by RDKit